miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|150114402|gb|EE515374.1|EE515374 GGGTGGGATTATGAAGAGCTTTCGAGAGCTGGACGCGTTTTACCAGAAAGCTATTGTGGATCATCGAGAGAAGAAGAAGA
CGGAAGACGAACGTGAAGATCTTATTGACGTGTTGCTCAAGCTACAGAGTCAAGAAACCAAACTCGGGTCGACACGGATT
CACTGATAAACACATCAGAGCCATTCTTATGGATTTATTTGTAGCAGGCATAGACACATCTGCAATAACAATGGATTGGA
CAATGGCTGAGATTGCAAGACACCCAAGGGTGATGAAGAAAGTACAGACCGAGATACGTGAACGTGTAGGAGACAAAGGG
AAAGTGACCTACGAGGATCTCGAAGGTCTAGAGTACATGAAAATGGTGATCAAGGAGACTTGGAGGTTACACGCACCGAG
TCCGATTCTGATTCCAAGAGAGGCAATGTCGAGATTCAAGGTCAAGGGCTATGACATTTTACCCCGGAACGCGGATTCTT
GTTATCACATGGGCCATTGGTCGTAGCCCTGATGTGTGGAAGGAGGCCTGATGAGTTTATCCCTGAAAGATTTGTGGACA
GCAATGTTGAAACTAAAAGGGACGAGCTATGAATTTGTTGCCGTTTTGGGAGTGGACCGGAAAGGGTGCCCGGCGATGTA
TATGGGATTTAAGTACGGTGGAGTTC




Most similar to sp|O65787|C71B6_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O65787|C71B6_ARATH Cytochrome P450 71B6 OS=Arabidopsis thaliana
           GN=CYP71B6 PE=2 SV=1
          Length = 503

 Score =  197 bits (502), Expect = 4e-50
 Identities = 111/224 (49%), Positives = 143/224 (63%), Gaps = 13/224 (5%)
 Frame = +3

Query: 15  RAFESWTRFTRKLLWIIERRRRRKTNVKI-LLTCCSSYRVKKPNSGRHGFTDKHIRAILM 191
           ++F+    F +K   I++ R ++KT  +  L+      + ++   G    TD HIRAI+M
Sbjct: 245 KSFQDLDTFYQKA--IVDHREKKKTEDREDLIDVLLKLQSQETKLGSSRITDTHIRAIIM 302

Query: 192 DLFVAGIDTSAITMDWTMAEIARHPRVMKKVQTEIRERVGDKGKVTYEDLEGLEYMKMVI 371
           DLFVAG+DTS IT+DWTMAE++RHPRVMKKVQ EIRE VGDKG VTY+DLE L YMKMVI
Sbjct: 303 DLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVI 362

Query: 372 KETWRLHAPSPILIPREAMSRFKVKGYDILPRNADSCYHMGHWS*P*CVEGGLMSLSLKD 551
           KETWRLHAPSPILIPREAM+ FK+KGYDI P    +  H+  W+               D
Sbjct: 363 KETWRLHAPSPILIPREAMTNFKIKGYDIYP---GTRIHVNAWA----------IGRNPD 409

Query: 552 LW------------TAMLKLKGTSYEFVAVLGVDRKGCPAMYMG 647
           +W             + ++ KGTS+E +   G  R+GCPAMY+G
Sbjct: 410 VWKDPDEFIPERFVDSNVETKGTSFELLP-FGSGRRGCPAMYVG 452